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docs: case05纵波 + case06横波一维原子链

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- case05 Readme.md 更新为纵波模拟描述
- case05 run_dynamics.py 注释更新
- case06 创建为一维原子链横波模拟
  - coord.txt: fix_x=1, fix_y=1, fix_z=0 (z方向自由)
  - driver.txt: amp_z=0.5, freq_z=0.1, phi_z=90°
  - input.txt: 横波配置 + step_plot_wave
  - Readme.md + doc/index.html + run_dynamics.py
- 模拟验证通过 (50000步/30s)
This commit is contained in:
Ying-Li Niu
2026-06-11 13:27:43 +08:00
parent 80520590d1
commit 131f52fe19
10 changed files with 119 additions and 99 deletions
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examples/case06/input/bond.txt
+2 -2
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@@ -1,2 +1,2 @@
bond_name k rest_length
k1 100.0 1.0
bond_name k rest_length
k1 1.0 1.0